changes in login pages - kills IDP?

Oleg Chaikovsky oleg.chaikovsky at aegisusa.net
Mon Mar 19 21:35:17 GMT 2012



Yeah - I pretty much felt this was the issue but the catalina.out log
file did not offer succinct clues to me (well, at least that pointed me
in the right direction). the threads errors were well known in this list
that its something that can be ignored. it also showed the deployment
descriptor for idp.xml which made me wonder why that showed up.

I realize this is the shib list, and not the tomcat list. If you can 
point me to a possible avenue
of solution I will go there otherwise I will check Tomcat lists


  see my catalina.out below
------------------------------------------------------------------------------------

Mar 18, 2012 5:36:27 PM org.apache.catalina.core.StandardService stop
INFO: Stopping service Catalina
Mar 18, 2012 5:36:27 PM org.apache.catalina.loader.WebappClassLoader
clearReferencesThreads
SEVERE: The web application [/idp] appears to have started a thread
named [MultiThreadedHttpConnectionManager cleanup] but has failed to
stop it. This is very likely to create a memory leak.
Mar 18, 2012 5:36:27 PM org.apache.catalina.loader.WebappClassLoader
clearReferencesThreads
SEVERE: The web application [/idp] appears to have started a thread
named [Timer-1] but has failed to stop it. This is very likely to create
a memory leak.
Mar 18, 2012 5:36:27 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type
[edu.vt.middleware.ldap.ssl.ThreadLocalTLSSocketFactory.ThreadLocalSslConfig]
(value
[edu.vt.middleware.ldap.ssl.ThreadLocalTLSSocketFactory$ThreadLocalSslConfig at 291fc2])
and a value of type
[edu.vt.middleware.ldap.ssl.DefaultSSLContextInitializer] (value
[edu.vt.middleware.ldap.ssl.DefaultSSLContextInitializer at 1e41869]) but
failed to remove it when the web application was stopped. This is very
likely to create a memory leak.
Mar 18, 2012 5:36:33 PM org.apache.catalina.core.AprLifecycleListener init
INFO: The APR based Apache Tomcat Native library which allows optimal
performance in production environments was not found on the
java.library.path:
/usr/java/jdk1.6.0_30/jre/lib/i386/client:/usr/java/jdk1.6.0_30/jre/lib/i386:/usr/java/jdk1.6.0_30/jre/../lib/i386::/apps/dev/apr/lib:/apps/dev/tomcat/lib:/usr/java/packages/lib/i386:/lib:/usr/lib
Mar 18, 2012 5:36:33 PM org.apache.catalina.startup.Catalina load
INFO: Initialization processed in 597 ms
Mar 18, 2012 5:36:33 PM org.apache.catalina.core.StandardService start
INFO: Starting service Catalina
Mar 18, 2012 5:36:33 PM org.apache.catalina.core.StandardEngine start
INFO: Starting Servlet Engine: Apache Tomcat/6.0.35
Mar 18, 2012 5:36:33 PM org.apache.catalina.startup.HostConfig
deployDescriptor
INFO: Deploying configuration descriptor host-manager.xml
Mar 18, 2012 5:36:33 PM org.apache.catalina.startup.HostConfig
deployDescriptor
INFO: Deploying configuration descriptor idp.xml
Mar 18, 2012 5:36:52 PM org.apache.catalina.startup.HostConfig
deployDescriptor
INFO: Deploying configuration descriptor manager.xml
Mar 18, 2012 5:36:52 PM org.apache.catalina.startup.HostConfig
deployDirectory
INFO: Deploying web application directory docs
Mar 18, 2012 5:36:52 PM org.apache.catalina.startup.HostConfig
deployDirectory
INFO: Deploying web application directory ROOT
Mar 18, 2012 5:36:53 PM org.apache.catalina.startup.HostConfig
deployDirectory
INFO: Deploying web application directory examples
Mar 18, 2012 5:36:54 PM org.apache.jk.common.ChannelSocket init
INFO: JK: ajp13 listening on /0.0.0.0:8009
Mar 18, 2012 5:36:55 PM org.apache.jk.server.JkMain start
INFO: Jk running ID=0 time=0/60  config=null
Mar 18, 2012 5:36:55 PM org.apache.catalina.startup.Catalina start
INFO: Server startup in 21699 ms
Mar 18, 2012 5:46:25 PM org.apache.catalina.startup.HostConfig
checkResources
INFO: Undeploying context [/idp]
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearReferencesThreads
SEVERE: The web application [/idp] appears to have started a thread
named [MultiThreadedHttpConnectionManager cleanup] but has failed to
stop it. This is very likely to create a memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearReferencesThreads
SEVERE: The web application [/idp] appears to have started a thread
named [Timer-1] but has failed to stop it. This is very likely to create
a memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type
[edu.vt.middleware.ldap.ssl.ThreadLocalTLSSocketFactory.ThreadLocalSslConfig]
(value
[edu.vt.middleware.ldap.ssl.ThreadLocalTLSSocketFactory$ThreadLocalSslConfig at cdf872])
and a value of type
[edu.vt.middleware.ldap.ssl.DefaultSSLContextInitializer] (value
[edu.vt.middleware.ldap.ssl.DefaultSSLContextInitializer at 7227a8]) but
failed to remove it when the web application was stopped. This is very
likely to create a memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type
[edu.vt.middleware.ldap.ssl.ThreadLocalTLSSocketFactory.ThreadLocalSslConfig]
(value
[edu.vt.middleware.ldap.ssl.ThreadLocalTLSSocketFactory$ThreadLocalSslConfig at cdf872])
and a value of type
[edu.vt.middleware.ldap.ssl.DefaultSSLContextInitializer] (value
[edu.vt.middleware.ldap.ssl.DefaultSSLContextInitializer at 899e6a]) but
failed to remove it when the web application was stopped. This is very
likely to create a memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type [org.apache.xml.security.algorithms.SignatureAlgorithm$3] (value
[org.apache.xml.security.algorithms.SignatureAlgorithm$3 at ff665a]) and a
value of type [java.util.HashMap] (value
[{http://www.w3.org/2000/09/xmldsig#rsa-sha1=Sun RSA private CRT key,
2048 bits
   modulus:
16774957166316599701928033554832039253852485214770847429037183550999407472154794428769314084553458618569368767425416970579927865437828569120168332236862572662033263830313265537940850585822713106202152712009235707865758613702994228646253876828004006839007305935142908128131478186830370045981046976949454722964517527335038776909287550692984808147324305248088824786976504147128089738525226782666052930298171765039807991275657908965711845707961568133778568910629331386418410838591150196363755405576614710192484295660534236440468050413549702471741429071674427433678471535233230183062931587244881548865468725312445147223121
   public exponent:  65537
   private exponent:
6866682574740610955698664207630485329861004026071646916684934054391581919457660102546567419111580242616544179985682302664872130950465035381338112042331999279862770172205227193590478640552144963914813781605379653248008092067232649829761093026303668026764255250043163348236616954057987659238804755338557179195906501884901059725482315193407349121815334406532744666376572609379454077469409301704644624475188898761418618692041321814188258518440585140728701971527987339555009143657245726077817681756258715361365577681356928363148633175287055810401716758709192865387439353439940336358153271997865798266395773756098481730573
   prime p:
143814101092153293258653559324891430200646806311937230263759738799195985390788589712423429222316968975445241393263260731613730257927831783963222448972237521305943640085521173257681255232586423802433777239165106154225369819035143866704082310864771217180414162905820539456957929677874813208982086883501527207311
   prime q:
116643340527279252927003860825181584741671227368400316234068481057813055512166697601286907635274229540819602559909386828184077409140582871307241153272641400341280176182413115626224095948832124738064986513101749880842450512552811982369985102199883494281759877028145103258402517039771829741372021637896309575711
   prime exponent p:
47161949138235784041304641607192374046299054904193889754317779365432047820602535515806404639303542994343182141752201041302505313080930782625655383574337073834739776198453103676611464324866066807481372971361772151099556710723763858327420190504686863903466151779481743656391653945662533919578909795996381017433
   prime exponent q:
64338314489839597693795299830164473607682274106845034584209553714068146904943985101376633414827168220563770281492354310573053607321405163722560697768477562002181013607855893873268151493878762792869847528298749659620881999149665080041695400452013190026875471789835014384057747356008237687426296751275061337143
   crt coefficient:
3555895788419534998235027295222359422458148621564387069997560520011089745481148283945291803213824850260701527791265770546745093988617962592904126073364820669584705919412947506657750858820550558495769326736869051967100418333431091312255283907006079895219015994819081402355445126906484868074631133512799897258}])
but failed to remove it when the web application was stopped. This is
very likely to create a memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type [org.apache.xml.security.algorithms.MessageDigestAlgorithm$1]
(value
[org.apache.xml.security.algorithms.MessageDigestAlgorithm$1 at 198c113])
and a value of type [java.util.HashMap] (value
[{http://www.w3.org/2000/09/xmldsig#sha1=SHA-1 Message Digest from SUN,
<initialized>
}]) but failed to remove it when the web application was stopped. This
is very likely to create a memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type [org.apache.xml.security.utils.UnsyncBufferedOutputStream$1] (value
[org.apache.xml.security.utils.UnsyncBufferedOutputStream$1 at 37eaab]) and
a value of type [byte[]] (value [[B at 10f80a9]) but failed to remove it
when the web application was stopped. This is very likely to create a
memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type [org.apache.xml.security.utils.UnsyncByteArrayOutputStream$1]
(value
[org.apache.xml.security.utils.UnsyncByteArrayOutputStream$1 at 1780f30])
and a value of type [byte[]] (value [[B at 12d297a]) but failed to remove
it when the web application was stopped. This is very likely to create a
memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type
[edu.vt.middleware.ldap.ssl.ThreadLocalTLSSocketFactory.ThreadLocalSslConfig]
(value
[edu.vt.middleware.ldap.ssl.ThreadLocalTLSSocketFactory$ThreadLocalSslConfig at cdf872])
and a value of type
[edu.vt.middleware.ldap.ssl.DefaultSSLContextInitializer] (value
[edu.vt.middleware.ldap.ssl.DefaultSSLContextInitializer at 1fe3238]) but
failed to remove it when the web application was stopped. This is very
likely to create a memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.loader.WebappClassLoader
clearThreadLocalMap
SEVERE: The web application [/idp] created a ThreadLocal with key of
type [org.apache.xml.security.algorithms.SignatureAlgorithm$1] (value
[org.apache.xml.security.algorithms.SignatureAlgorithm$1 at 19331eb]) and a
value of type [java.util.HashMap] (value
[{http://www.w3.org/2000/09/xmldsig#rsa-sha1=org.apache.xml.security.algorithms.implementations.SignatureBaseRSA$SignatureRSASHA1@b27bb5}])
but failed to remove it when the web application was stopped. This is
very likely to create a memory leak.
Mar 18, 2012 5:46:25 PM org.apache.catalina.startup.HostConfig
deployDescriptor
INFO: Deploying configuration descriptor idp.xml
Mar 18, 2012 5:46:36 PM org.apache.catalina.core.StandardService stop
INFO: Stopping service Catalina
Mar 18, 2012 5:46:40 PM org.apache.catalina.core.AprLifecycleListener init
INFO: The APR based Apache Tomcat Native library which allows optimal
performance in production environments was not found on the
java.library.path:
/usr/java/jdk1.6.0_30/jre/lib/i386/client:/usr/java/jdk1.6.0_30/jre/lib/i386:/usr/java/jdk1.6.0_30/jre/../lib/i386::/apps/dev/apr/lib:/apps/dev/tomcat/lib:/usr/java/packages/lib/i386:/lib:/usr/lib
Mar 18, 2012 5:46:40 PM org.apache.catalina.startup.Catalina load
INFO: Initialization processed in 535 ms
Mar 18, 2012 5:46:40 PM org.apache.catalina.core.StandardService start
INFO: Starting service Catalina
Mar 18, 2012 5:46:40 PM org.apache.catalina.core.StandardEngine start
INFO: Starting Servlet Engine: Apache Tomcat/6.0.35
Mar 18, 2012 5:46:40 PM org.apache.catalina.startup.HostConfig
deployDescriptor
INFO: Deploying configuration descriptor host-manager.xml
Mar 18, 2012 5:46:40 PM org.apache.catalina.startup.HostConfig
deployDescriptor
INFO: Deploying configuration descriptor idp.xml
Mar 18, 2012 5:46:41 PM org.apache.catalina.startup.HostConfig
deployDescriptor
INFO: Deploying configuration descriptor manager.xml
Mar 18, 2012 5:46:41 PM org.apache.catalina.startup.HostConfig
deployDirectory
INFO: Deploying web application directory docs
Mar 18, 2012 5:46:41 PM org.apache.catalina.startup.HostConfig
deployDirectory
INFO: Deploying web application directory ROOT
Mar 18, 2012 5:46:41 PM org.apache.catalina.startup.HostConfig
deployDirectory
INFO: Deploying web application directory examples
Mar 18, 2012 5:46:41 PM org.apache.jk.common.ChannelSocket init
INFO: JK: ajp13 listening on /0.0.0.0:8009
Mar 18, 2012 5:46:41 PM org.apache.jk.server.JkMain start
INFO: Jk running ID=0 time=0/27  config=null
Mar 18, 2012 5:46:41 PM org.apache.catalina.startup.Catalina start
INFO: Server startup in 1034 ms
---------------------------------------------------------------------

------------------------------

Message: 4
Date: Sun, 18 Mar 2012 22:11:40 -0700
From: Stephen Chan<sychan at lbl.gov>
Subject: Re: changes in login pages - kills IDP?
To: Shib Users<users at shibboleth.net>
Message-ID:
<CA+n9YfpNOGtJ6Ogd5nNRu9EHtgmaQq=XmFVBdKQUXXBu=vA_qQ at mail.gmail.com>
Content-Type: text/plain; charset="iso-8859-1"

    Check the contents of /var/log/tomcat6/catalina.out
    No doubt tomcat6 has left some complaints about the contents of the
warfile.

    Steve
----------------

  On Sun, Mar 18, 2012 at 5:47 PM, Oleg Chaikovsky<
oleg.chaikovsky at aegisusa.net>   wrote:

can't figure out where to look. Any help or pointers in the right
direction would be great. RHEL 6, using TOmcat 6. We have followed all
recommendations with the OS and JVM changes, and as I said it works
great with the default login pages...
------------------------------------------------

  --
Oleg Chaikovsky
AegisUSA - The Identity Company
303-222-1064
714-742-2823 mobile
http://www.aegisusa.com
twitter- @aegisidentity




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